CDS

Accession Number TCMCG065C04460
gbkey CDS
Protein Id XP_004955565.1
Location complement(join(3619660..3619923,3620202..3620243,3620331..3620384,3620544..3620607,3620764..3620858,3620928..3621035,3621128..3621201,3621794..3621866,3621970..3622017,3622123..3622306,3622698..3622876,3623132..3623224,3623606..3623719,3624495..3624569,3624829..3625089,3625632..3625745,3625866..3625922,3626842..3626998,3627107..3627171,3627865..3627948,3628028..3628070,3628168..3628274,3628565..3628633,3628975..3629241))
Gene LOC101767113
GeneID 101767113
Organism Setaria italica

Protein

Length 896aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA207554
db_source XM_004955508.3
Definition probable polyribonucleotide nucleotidyltransferase 1, chloroplastic [Setaria italica]

EGGNOG-MAPPER Annotation

COG_category J
Description 3' exoribonuclease family, domain 1
KEGG_TC -
KEGG_Module M00394        [VIEW IN KEGG]
KEGG_Reaction R00437        [VIEW IN KEGG]
R00438        [VIEW IN KEGG]
R00439        [VIEW IN KEGG]
R00440        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K00962        [VIEW IN KEGG]
EC 2.7.7.8        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko03018        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0000175        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004527        [VIEW IN EMBL-EBI]
GO:0004532        [VIEW IN EMBL-EBI]
GO:0004540        [VIEW IN EMBL-EBI]
GO:0004654        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006109        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006721        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006778        [VIEW IN EMBL-EBI]
GO:0006779        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008299        [VIEW IN EMBL-EBI]
GO:0008408        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009267        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0009991        [VIEW IN EMBL-EBI]
GO:0010322        [VIEW IN EMBL-EBI]
GO:0010323        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010563        [VIEW IN EMBL-EBI]
GO:0010565        [VIEW IN EMBL-EBI]
GO:0010675        [VIEW IN EMBL-EBI]
GO:0010677        [VIEW IN EMBL-EBI]
GO:0015994        [VIEW IN EMBL-EBI]
GO:0015995        [VIEW IN EMBL-EBI]
GO:0016036        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016108        [VIEW IN EMBL-EBI]
GO:0016109        [VIEW IN EMBL-EBI]
GO:0016114        [VIEW IN EMBL-EBI]
GO:0016116        [VIEW IN EMBL-EBI]
GO:0016117        [VIEW IN EMBL-EBI]
GO:0016119        [VIEW IN EMBL-EBI]
GO:0016120        [VIEW IN EMBL-EBI]
GO:0016122        [VIEW IN EMBL-EBI]
GO:0016123        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016796        [VIEW IN EMBL-EBI]
GO:0016896        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019216        [VIEW IN EMBL-EBI]
GO:0019220        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0019747        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031425        [VIEW IN EMBL-EBI]
GO:0031667        [VIEW IN EMBL-EBI]
GO:0031668        [VIEW IN EMBL-EBI]
GO:0031669        [VIEW IN EMBL-EBI]
GO:0033013        [VIEW IN EMBL-EBI]
GO:0033014        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0042214        [VIEW IN EMBL-EBI]
GO:0042440        [VIEW IN EMBL-EBI]
GO:0042594        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045827        [VIEW IN EMBL-EBI]
GO:0045833        [VIEW IN EMBL-EBI]
GO:0045912        [VIEW IN EMBL-EBI]
GO:0045936        [VIEW IN EMBL-EBI]
GO:0046148        [VIEW IN EMBL-EBI]
GO:0046246        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0046890        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051055        [VIEW IN EMBL-EBI]
GO:0051174        [VIEW IN EMBL-EBI]
GO:0051186        [VIEW IN EMBL-EBI]
GO:0051188        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0062012        [VIEW IN EMBL-EBI]
GO:0062014        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071071        [VIEW IN EMBL-EBI]
GO:0071072        [VIEW IN EMBL-EBI]
GO:0071496        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090503        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1903725        [VIEW IN EMBL-EBI]
GO:1903726        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCTCGCGGGCCCCGCCGCGCTCCACCTCCTCCTCCCGGCGCCTCCGCCGCACCGCCGCCACCTCGCGTTCGCGCTCCCGCAGCAGCACCCCGAGCCGCCGCTCCACGCCTCGCTCCCGCGCGCCGCGTGCTCGCGCCGCCGCGCGCGGAGGAGGGCGCCAGCGCAGAGGCATGTCGTTGCCAGGGCATCCGCCGCGGTCGCGGAGGAGGAGAGCAGCTCCGGACCGGCCAAGTTCTCCGTCAGGATCCCCGTCGGCGACCGCGAGATACTGGTGGAGACGGGCCACATTGGGAGGCAAGCGAGTGCTTCTGTAATGGTCACGGACGGGGAAACAATTCTCTACTGTTCTGTTTGTCTGTCCGATTCTCCAAACGACCCTTCTGACTTTTTCCCTTTATCGGTTCACTATCAAGAGCGCCTTTCAGCTGCTGGAAGAACTAGTGGTGGTTTCTTCAAACGAGAAGGCAAGGCAAAAGACCATGAGGTTTTAGTATGCAGATTGATAGACAGGCCCCTACGACCTACTATGCCCAAGGGTTTCTACTATGAAACTCAAGTTCTATCCTGGGTCTTCAGTTATGATGGCATTCACTCTCCGGATTGCTTGGCTATCACAGCTGCTGGTATAGCCGTGGCTCTCTCTGAAATTCCAAATAAACAAACAATTGCTGGGGTAAGAGTTGGCCTGATTAACGGCCAGTTTGTTATTAACCCAACTACTGAACAAATGGAGAATTCAGAGTTGGATTTGATGATGGCTGGGACTGATAGTGCCATATTGATGATTGAGGGCTACTGTGATTTCCTGACTGAGGAGAAGCTGCTAGAAGCTGTGGAAGCTGGGCAGGTGGCAATTCGAGAGATCTGCAAAGCAATTGATGTTCTTGTCCAGAACTGTGGAAAGAAGAAGATGGTTGATGCTATTGCCTTACCACCTCCTGAACTCTACAGGCATGTTGAAGATATTTCTGGTGATGAGTTGGTGAAGGCATTGCAAATAAAAGAAAAGATTCCCAGAAGGAAAGCTCTTTCAGCAGTGGAGGAGAAAGTTATAACTATACTTTCTGAACAGGGTTATGTTTGCAAAGATATCTCATCAGGAGTTGCTGAAAGTTTGGATGATATTGTAGAGGACGAAGATGAGGATGAAGTTATAGTGGATGGAGAAGTAGATGAAGGTGATGTTCACATCAAGCCGGTTTCAAGGAAGCCCCCTCGTCAGCTATTTGCAGAAGTTGATGTCAAGCTAGTCTTCAAGGAGGTTTCATCTAAATATTTACGACGATGCATTGTAGAGGGCGGAAAGCGAAGCGATGGACGGAGTCCTTGGGAACTTCGACCCATTAATTCTCAATGTGGGTTACTTCCACGAGCACATGGTAGTGCTCTGTTCACGAGGGGAGAAACACAGTCACTGGCTGTGGTCACTTTAGGTGGTTATCAAATGGCACAACGAATTGACAACCTTGTAGACACCGAGGAATCAAAAAGCTTCTATCTTCAGTACTCATTTCCTCCATCATGTGTTGGTGAAGTTGGTCGAATTGGAGCACCTAGTAGGAGAGAGATTGGACACGGTATGCTTGCAGAAAGGGCACTGGAGCCAATTTTACCTCTGGAAGAGGATTTTCCTTACACTATTCGTGTCGAGAGTACTATCACTGAAAGTAATGGCTCATCCAGCATGGCTTCTGTTTGTGGAGGTTGTTTAGCACTTCAAGATGCTGGGGTTCCTATAAAGTTTCCTGTTGCTGGAATAGCAATGGGCTTGGTTCTTGATACACAAGAATTTGGTGGCGATGGTAGCCCACTTATACTTTCTGATATTACTGGAGCTGAAGATGCCTCTGGTGATATGGATTTGAAGGTTGCTGGTAATGAAAGTGGTATAACTGCTTTCCAGATGGACATCAAGGTAGTTGGGATAACTCTACCTGTGATGGAACAAGCACTCCTTCAGGCTAGGGATGGTAGACGGCATATTCTGAATGAAATGTCAAAATCTTCACCTCCACCATCAAAAGCACTATCTCCGCATGCTCCCTTAATTCACGTCATGAAGGTCAAACCTAACAAGGTGAATTTAATAATTGGTTCTGGTGGAAAGACAATAAAAAGTATAATTGAGGAGACTGGGGTAGATGCTATTGATACTGGAGATGATGGCACGGTAAAAATTACCGCAAGGGACTTATCAAGCTTAGAGAAGTCAAAAACTATAATAGCTAACCTTACCATGGTTCCAAAAGTTGGGGAAATTTACAGGAATTGTGAGATCAAATCAATAGCTCCATACGGTGCCTTTGTTGAAATTGCTCCAGGACGTGAGGGTCTATGTCATATCAGTGAGTTAAGTTCGGGCTGGTTGGCCAAGGCTGAGGATGCTTTCAAAGTAGGTGATCGCATAGACGTCAAGCTTATTGAGATAAATGACAAGGGCCAACTACGACTAAGTTCTCGAGCTTTGCTTCCTAATGCGGATTCAGAATCCAACAGCAAGCAGCAAACAAGCGGCTCAACAAAAGAAAAGGTGCCGCAAAAAGATGATCTTATCAAGATGACAACAAGGAGAGCCAGGCGTAAGAAACAGTCTGAGCCGTCAGGAGCTGAAAATGCCACAACGAAGACTCTTGAAAAGAGTGCCGCTGCTTCAGCTACTTCACAAGGCAGTGAAACCGCAAAGAAGTAG
Protein:  
MLAGPAALHLLLPAPPPHRRHLAFALPQQHPEPPLHASLPRAACSRRRARRRAPAQRHVVARASAAVAEEESSSGPAKFSVRIPVGDREILVETGHIGRQASASVMVTDGETILYCSVCLSDSPNDPSDFFPLSVHYQERLSAAGRTSGGFFKREGKAKDHEVLVCRLIDRPLRPTMPKGFYYETQVLSWVFSYDGIHSPDCLAITAAGIAVALSEIPNKQTIAGVRVGLINGQFVINPTTEQMENSELDLMMAGTDSAILMIEGYCDFLTEEKLLEAVEAGQVAIREICKAIDVLVQNCGKKKMVDAIALPPPELYRHVEDISGDELVKALQIKEKIPRRKALSAVEEKVITILSEQGYVCKDISSGVAESLDDIVEDEDEDEVIVDGEVDEGDVHIKPVSRKPPRQLFAEVDVKLVFKEVSSKYLRRCIVEGGKRSDGRSPWELRPINSQCGLLPRAHGSALFTRGETQSLAVVTLGGYQMAQRIDNLVDTEESKSFYLQYSFPPSCVGEVGRIGAPSRREIGHGMLAERALEPILPLEEDFPYTIRVESTITESNGSSSMASVCGGCLALQDAGVPIKFPVAGIAMGLVLDTQEFGGDGSPLILSDITGAEDASGDMDLKVAGNESGITAFQMDIKVVGITLPVMEQALLQARDGRRHILNEMSKSSPPPSKALSPHAPLIHVMKVKPNKVNLIIGSGGKTIKSIIEETGVDAIDTGDDGTVKITARDLSSLEKSKTIIANLTMVPKVGEIYRNCEIKSIAPYGAFVEIAPGREGLCHISELSSGWLAKAEDAFKVGDRIDVKLIEINDKGQLRLSSRALLPNADSESNSKQQTSGSTKEKVPQKDDLIKMTTRRARRKKQSEPSGAENATTKTLEKSAAASATSQGSETAKK